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EshelbianPlasticity::SetIntegrationAtFrontFace Struct Reference
Collaboration diagram for EshelbianPlasticity::SetIntegrationAtFrontFace:
[legend]

Classes

struct  Fe
 

Public Types

using FunRule = boost::function< int(int)>
 

Public Member Functions

 SetIntegrationAtFrontFace (boost::shared_ptr< Range > front_nodes, boost::shared_ptr< Range > front_edges)
 
 SetIntegrationAtFrontFace (boost::shared_ptr< Range > front_nodes, boost::shared_ptr< Range > front_edges, FunRule fun_rule)
 
MoFEMErrorCode operator() (ForcesAndSourcesCore *fe_raw_ptr, int order_row, int order_col, int order_data)
 

Public Attributes

FunRule funRule = [](int p) { return 2 * (p + 1); }
 

Private Attributes

boost::shared_ptr< RangefrontNodes
 
boost::shared_ptr< RangefrontEdges
 

Static Private Attributes

static std::map< long int, MatrixDouble > mapRefCoords
 

Detailed Description

Definition at line 630 of file EshelbianPlasticity.cpp.

Member Typedef Documentation

◆ FunRule

Constructor & Destructor Documentation

◆ SetIntegrationAtFrontFace() [1/2]

EshelbianPlasticity::SetIntegrationAtFrontFace::SetIntegrationAtFrontFace ( boost::shared_ptr< Range front_nodes,
boost::shared_ptr< Range front_edges 
)
inline

Definition at line 635 of file EshelbianPlasticity.cpp.

637 : frontNodes(front_nodes), frontEdges(front_edges){};

◆ SetIntegrationAtFrontFace() [2/2]

EshelbianPlasticity::SetIntegrationAtFrontFace::SetIntegrationAtFrontFace ( boost::shared_ptr< Range front_nodes,
boost::shared_ptr< Range front_edges,
FunRule  fun_rule 
)
inline

Definition at line 639 of file EshelbianPlasticity.cpp.

642 : frontNodes(front_nodes), frontEdges(front_edges), funRule(fun_rule){};

Member Function Documentation

◆ operator()()

MoFEMErrorCode EshelbianPlasticity::SetIntegrationAtFrontFace::operator() ( ForcesAndSourcesCore fe_raw_ptr,
int  order_row,
int  order_col,
int  order_data 
)
inline
Examples
mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 644 of file EshelbianPlasticity.cpp.

645 {
647
648 constexpr bool debug = false;
649
650 constexpr int numNodes = 3;
651 constexpr int numEdges = 3;
652 constexpr int refinementLevels = 6;
653
654 auto &m_field = fe_raw_ptr->mField;
655 auto fe_ptr = static_cast<Fe *>(fe_raw_ptr);
656 auto fe_handle = fe_ptr->getFEEntityHandle();
657
658 auto set_base_quadrature = [&]() {
660 int rule = funRule(order_data);
661 if (rule < QUAD_2D_TABLE_SIZE) {
662 if (QUAD_2D_TABLE[rule]->dim != 2) {
663 SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "wrong dimension");
664 }
665 if (QUAD_2D_TABLE[rule]->order < rule) {
666 SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
667 "wrong order %d != %d", QUAD_2D_TABLE[rule]->order, rule);
668 }
669 const size_t nb_gauss_pts = QUAD_2D_TABLE[rule]->npoints;
670 fe_ptr->gaussPts.resize(3, nb_gauss_pts, false);
671 cblas_dcopy(nb_gauss_pts, &QUAD_2D_TABLE[rule]->points[1], 3,
672 &fe_ptr->gaussPts(0, 0), 1);
673 cblas_dcopy(nb_gauss_pts, &QUAD_2D_TABLE[rule]->points[2], 3,
674 &fe_ptr->gaussPts(1, 0), 1);
675 cblas_dcopy(nb_gauss_pts, QUAD_2D_TABLE[rule]->weights, 1,
676 &fe_ptr->gaussPts(2, 0), 1);
677 auto &data = fe_ptr->dataOnElement[H1];
678 data->dataOnEntities[MBVERTEX][0].getN(NOBASE).resize(nb_gauss_pts, 3,
679 false);
680 double *shape_ptr =
681 &*data->dataOnEntities[MBVERTEX][0].getN(NOBASE).data().begin();
682 cblas_dcopy(3 * nb_gauss_pts, QUAD_2D_TABLE[rule]->points, 1, shape_ptr,
683 1);
684 data->dataOnEntities[MBVERTEX][0].getDiffN(NOBASE).resize(3, 2, false);
685 std::copy(
687 data->dataOnEntities[MBVERTEX][0].getDiffN(NOBASE).data().begin());
688
689 } else {
690 SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
691 "rule > quadrature order %d < %d", rule, QUAD_3D_TABLE_SIZE);
692 }
694 };
695
696 CHKERR set_base_quadrature();
697
699
700 auto get_singular_nodes = [&]() {
701 int num_nodes;
702 const EntityHandle *conn;
703 CHKERR m_field.get_moab().get_connectivity(fe_handle, conn, num_nodes,
704 true);
705 std::bitset<numNodes> singular_nodes;
706 for (auto nn = 0; nn != numNodes; ++nn) {
707 if (frontNodes->find(conn[nn]) != frontNodes->end()) {
708 singular_nodes.set(nn);
709 } else {
710 singular_nodes.reset(nn);
711 }
712 }
713 return singular_nodes;
714 };
715
716 auto get_singular_edges = [&]() {
717 std::bitset<numEdges> singular_edges;
718 for (int ee = 0; ee != numEdges; ee++) {
719 EntityHandle edge;
720 CHKERR m_field.get_moab().side_element(fe_handle, 1, ee, edge);
721 if (frontEdges->find(edge) != frontEdges->end()) {
722 singular_edges.set(ee);
723 } else {
724 singular_edges.reset(ee);
725 }
726 }
727 return singular_edges;
728 };
729
730 auto set_gauss_pts = [&](auto &ref_gauss_pts) {
732 fe_ptr->gaussPts.swap(ref_gauss_pts);
733 const size_t nb_gauss_pts = fe_ptr->gaussPts.size2();
734 auto &data = fe_ptr->dataOnElement[H1];
735 data->dataOnEntities[MBVERTEX][0].getN(NOBASE).resize(nb_gauss_pts, 4);
736 double *shape_ptr =
737 &*data->dataOnEntities[MBVERTEX][0].getN(NOBASE).data().begin();
738 CHKERR ShapeMBTRI(shape_ptr, &fe_ptr->gaussPts(0, 0),
739 &fe_ptr->gaussPts(1, 0), nb_gauss_pts);
741 };
742
743 auto singular_nodes = get_singular_nodes();
744 if (singular_nodes.count()) {
745 auto it_map_ref_coords = mapRefCoords.find(singular_nodes.to_ulong());
746 if (it_map_ref_coords != mapRefCoords.end()) {
747 CHKERR set_gauss_pts(it_map_ref_coords->second);
749 } else {
750
751 auto refine_quadrature = [&]() {
753
754 const int max_level = refinementLevels;
755
756 moab::Core moab_ref;
757 double base_coords[] = {0, 0, 0, 1, 0, 0, 0, 1, 0};
758 EntityHandle nodes[numNodes];
759 for (int nn = 0; nn != numNodes; nn++)
760 CHKERR moab_ref.create_vertex(&base_coords[3 * nn], nodes[nn]);
761 EntityHandle tri;
762 CHKERR moab_ref.create_element(MBTRI, nodes, numNodes, tri);
763 MoFEM::CoreTmp<-1> mofem_ref_core(moab_ref, PETSC_COMM_SELF, -2);
764 MoFEM::Interface &m_field_ref = mofem_ref_core;
765 {
766 Range tris(tri, tri);
767 Range edges;
768 CHKERR m_field_ref.get_moab().get_adjacencies(
769 tris, 1, true, edges, moab::Interface::UNION);
770 CHKERR m_field_ref.getInterface<BitRefManager>()->setBitRefLevel(
771 tris, BitRefLevel().set(0), false, VERBOSE);
772 }
773
774 Range nodes_at_front;
775 for (int nn = 0; nn != numNodes; nn++) {
776 if (singular_nodes[nn]) {
777 EntityHandle ent;
778 CHKERR moab_ref.side_element(tri, 0, nn, ent);
779 nodes_at_front.insert(ent);
780 }
781 }
782
783 auto singular_edges = get_singular_edges();
784
785 EntityHandle meshset;
786 CHKERR moab_ref.create_meshset(MESHSET_SET, meshset);
787 for (int ee = 0; ee != numEdges; ee++) {
788 if (singular_edges[ee]) {
789 EntityHandle ent;
790 CHKERR moab_ref.side_element(tri, 1, ee, ent);
791 CHKERR moab_ref.add_entities(meshset, &ent, 1);
792 }
793 }
794
795 // refine mesh
796 auto *m_ref = m_field_ref.getInterface<MeshRefinement>();
797 for (int ll = 0; ll != max_level; ll++) {
798 Range edges;
799 CHKERR m_field_ref.getInterface<BitRefManager>()
800 ->getEntitiesByTypeAndRefLevel(BitRefLevel().set(ll),
801 BitRefLevel().set(), MBEDGE,
802 edges);
803 Range ref_edges;
804 CHKERR moab_ref.get_adjacencies(
805 nodes_at_front, 1, true, ref_edges, moab::Interface::UNION);
806 ref_edges = intersect(ref_edges, edges);
807 Range ents;
808 CHKERR moab_ref.get_entities_by_type(meshset, MBEDGE, ents, true);
809 ref_edges = intersect(ref_edges, ents);
810 Range tris;
811 CHKERR m_field_ref.getInterface<BitRefManager>()
812 ->getEntitiesByTypeAndRefLevel(
813 BitRefLevel().set(ll), BitRefLevel().set(), MBTRI, tris);
814 CHKERR m_ref->addVerticesInTheMiddleOfEdges(
815 ref_edges, BitRefLevel().set(ll + 1));
816 CHKERR m_ref->refineTris(tris, BitRefLevel().set(ll + 1));
817 CHKERR m_field_ref.getInterface<BitRefManager>()
818 ->updateMeshsetByEntitiesChildren(meshset,
819 BitRefLevel().set(ll + 1),
820 meshset, MBEDGE, true);
821 }
822
823 // get ref coords
824 Range tris;
825 CHKERR m_field_ref.getInterface<BitRefManager>()
826 ->getEntitiesByTypeAndRefLevel(BitRefLevel().set(max_level),
827 BitRefLevel().set(), MBTRI,
828 tris);
829
830 if (debug) {
831 CHKERR save_range(moab_ref, "ref_tris.vtk", tris);
832 SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "debug");
833 }
834
835 MatrixDouble ref_coords(tris.size(), 9, false);
836 int tt = 0;
837 for (Range::iterator tit = tris.begin(); tit != tris.end();
838 tit++, tt++) {
839 int num_nodes;
840 const EntityHandle *conn;
841 CHKERR moab_ref.get_connectivity(*tit, conn, num_nodes, false);
842 CHKERR moab_ref.get_coords(conn, num_nodes, &ref_coords(tt, 0));
843 }
844
845 auto &data = fe_ptr->dataOnElement[H1];
846 const size_t nb_gauss_pts = fe_ptr->gaussPts.size2();
847 MatrixDouble ref_gauss_pts(3, nb_gauss_pts * ref_coords.size1());
848 MatrixDouble &shape_n =
849 data->dataOnEntities[MBVERTEX][0].getN(NOBASE);
850 int gg = 0;
851 for (size_t tt = 0; tt != ref_coords.size1(); tt++) {
852 double *tri_coords = &ref_coords(tt, 0);
854 CHKERR Tools::getTriNormal(tri_coords, &t_normal(0));
855 auto det = t_normal.l2();
856 for (size_t ggg = 0; ggg != nb_gauss_pts; ++ggg, ++gg) {
857 for (int dd = 0; dd != 2; dd++) {
858 ref_gauss_pts(dd, gg) =
859 shape_n(ggg, 0) * tri_coords[3 * 0 + dd] +
860 shape_n(ggg, 1) * tri_coords[3 * 1 + dd] +
861 shape_n(ggg, 2) * tri_coords[3 * 2 + dd];
862 }
863 ref_gauss_pts(2, gg) = fe_ptr->gaussPts(2, ggg) * det;
864 }
865 }
866
867 mapRefCoords[singular_nodes.to_ulong()].swap(ref_gauss_pts);
868 CHKERR set_gauss_pts(mapRefCoords[singular_nodes.to_ulong()]);
869
871 };
872
873 CHKERR refine_quadrature();
874 }
875 }
876 }
877
879 }
@ VERBOSE
@ NOBASE
Definition definitions.h:59
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
@ H1
continuous field
Definition definitions.h:85
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
@ MOFEM_DATA_INCONSISTENCY
Definition definitions.h:31
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
constexpr int order
Order displacement.
static const bool debug
PetscErrorCode ShapeMBTRI(double *N, const double *X, const double *Y, const int G_DIM)
calculate shape functions on triangle
Definition fem_tools.c:182
const Tensor2_symmetric_Expr< const ddTensor0< T, Dim, i, j >, typename promote< T, double >::V, Dim, i, j > dd(const Tensor0< T * > &a, const Index< i, Dim > index1, const Index< j, Dim > index2, const Tensor1< int, Dim > &d_ijk, const Tensor1< double, Dim > &d_xyz)
Definition ddTensor0.hpp:33
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
Definition Types.hpp:40
#define QUAD_2D_TABLE_SIZE
Definition quad.h:174
#define QUAD_3D_TABLE_SIZE
Definition quad.h:186
static QUAD *const QUAD_2D_TABLE[]
Definition quad.h:175
static PetscBool setSingularity
static std::map< long int, MatrixDouble > mapRefCoords
Managing BitRefLevels.
virtual moab::Interface & get_moab()=0
Deprecated interface functions.
Mesh refinement interface.
static constexpr std::array< double, 6 > diffShapeFunMBTRI
Definition Tools.hpp:104
static MoFEMErrorCode getTriNormal(const double *coords, double *normal, double *d_normal=nullptr)
Get the Tri Normal objectGet triangle normal.
Definition Tools.cpp:353
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface reference to pointer of interface.
int npoints
Definition quad.h:29
auto save_range

Member Data Documentation

◆ frontEdges

boost::shared_ptr<Range> EshelbianPlasticity::SetIntegrationAtFrontFace::frontEdges
private

◆ frontNodes

boost::shared_ptr<Range> EshelbianPlasticity::SetIntegrationAtFrontFace::frontNodes
private

◆ funRule

FunRule EshelbianPlasticity::SetIntegrationAtFrontFace::funRule = [](int p) { return 2 * (p + 1); }
Examples
mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 633 of file EshelbianPlasticity.cpp.

633{ return 2 * (p + 1); };

◆ mapRefCoords

std::map<long int, MatrixDouble> EshelbianPlasticity::SetIntegrationAtFrontFace::mapRefCoords
inlinestaticprivate

The documentation for this struct was generated from the following file: